CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Methylibium petroleiphilum PM1
 

Methylibium petroleiphilum PM1

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 4044195
G + C content (%) 69.2
Coding sequences 3819
Coding density (%) 92.32
Average gene length (bp) 978
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 6
Max spacer hisKA - HATPase domains 127
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
19 37 1 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (52 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 38
Histidine Kinase, Hybrid 11
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (49) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 19
NtrC 4OmpR 10PglZ 0PilB 0PleD 0
PleD_VieA 2PrrA 2RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 3
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page
Date : 27 April 2024, 23:05:43 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales