CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Mesorhizobium loti MAFF303099
 

Mesorhizobium loti MAFF303099

Genome
 

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Total size (bp) 7036071
G + C content (%) 62.75
Coding sequences 6743
Coding density (%) 86.98
Average gene length (bp) 908

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 22
Max spacer hisKA - HATPase domains 53
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
44 23 4 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (50 + 5) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 38
Histidine Kinase, Hybrid 12
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 5
P2CS Predicted Response Regulators (54) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 9
NtrC 5OmpR 22PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 2RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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