CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Magnetococcus sp. MC-1
 

Magnetococcus sp. MC-1

Genome
 

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Total size (bp) 4719581
G + C content (%) 54.17
Coding sequences 3716
Coding density (%) 86.5
Average gene length (bp) 1099

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 41
Max spacer hisKA - HATPase domains 88
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
109 29 4 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (99 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 30
Histidine Kinase, Hybrid 47
Histidine Kinase, Unorthodox 17
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (80) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 2CheY 14CitT 0CsrA 0
CyC-C 2FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 2
NtrC 7OmpR 11PglZ 0PilB 0PleD 5
PleD_VieA 2PrrA 0RpfG 6RsbU 8Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 17
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 1
Hpt 3

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