CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Magnetospirillum magneticum AMB-1
 

Magnetospirillum magneticum AMB-1

Genome
 

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Total size (bp) 4967148
G + C content (%) 65.09
Coding sequences 4561
Coding density (%) 88.37
Average gene length (bp) 962

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 22
Max spacer hisKA - HATPase domains 73
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
126 23 10 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (106 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 75
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 10
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (98) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 27CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 11
NtrC 6OmpR 15PglZ 0PilB 0PleD 5
PleD_VieA 2PrrA 0RpfG 10RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 14
misPredicted TCS proteins (23)
misPredicted Histidine Kinase 9
misPredicted Response Regulator 14
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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