CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Magnetospirillum gryphiswaldense MSR-1 v2
 

Magnetospirillum gryphiswaldense MSR-1 v2

Genome
 

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Total size (bp) 4365796
G + C content (%) 63.29
Coding sequences 4255
Coding density (%) 93.06
Average gene length (bp) 955

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 37
Max spacer hisKA - HATPase domains 86
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
121 23 6 2 Pentad 1
Hexad1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (101 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 68
Histidine Kinase, Hybrid 16
Histidine Kinase, Unorthodox 13
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (97) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family YesN Family CheB Family RpfG Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family YesN Family CheB Family RpfG Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 4
CheC 0CheV 0CheY 32CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 9
NtrC 4OmpR 18PglZ 0PilB 0PleD 5
PleD_VieA 2PrrA 0RpfG 6RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 12
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(5)
HisKa 2
Hpt 3

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