CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Leptospirillum ferrooxidans C2-3
 

Leptospirillum ferrooxidans C2-3

Genome
 

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Total size (bp) 2559538
G + C content (%) 50.04
Coding sequences 2417
Coding density (%) 87.65
Average gene length (bp) 928

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 58
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
10 9 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (14 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 11
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (23) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family RpfG Family CheV Family PleD_VieA Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family RpfG Family CheV Family PleD_VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 1CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 6OmpR 4PglZ 0PilB 0PleD 0
PleD_VieA 1PrrA 0RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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