CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)
 

Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)

Genome
 

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Total size (bp) 3603977
G + C content (%) 38.89
Coding sequences 3277
Coding density (%) 92.38
Average gene length (bp) 1016

Histidine domain Logo
Mean spacer hisKA - HATPase domains 51
Min spacer hisKA - HATPase domains 20
Max spacer hisKA - HATPase domains 173
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
67 10 2 0 Hexad1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (60 + 4) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 36
Histidine Kinase, Hybrid 21
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 4
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family YesN Family CheB Family RpfG Family RsbU Family VieA Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family YesN Family CheB Family RpfG Family RsbU Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 14CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 4
NtrC 1OmpR 3PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 1RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 3
Hpt 1

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