CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Leifsonia xyli subsp. xyli str. CTCB07
 

Leifsonia xyli subsp. xyli str. CTCB07

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 2584158
G + C content (%) 67.67
Coding sequences 2030
Coding density (%) 70.16
Average gene length (bp) 893

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 30
Max spacer hisKA - HATPase domains 122
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
13 13 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (16 + 0) - Phylogenetic Tree - Data Heatmap
Classic Classic
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (22) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family AmiR_NasR Family CheY Family LmbE Family unclassified Family OmpR Family NarL Family AmiR_NasR Family CheY Family LmbE Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 1LysR 0LytTR 0MerR 0NarL 9
NtrC 0OmpR 7PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 1
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

Locations of visitors to this page