CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Leifsonia xyli subsp. cynodontis DSM 46306
 

Leifsonia xyli subsp. cynodontis DSM 46306

Genome
 

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Total size (bp) 2686418
G + C content (%) 68.35
Coding sequences 2470
Coding density (%) 80.26
Average gene length (bp) 873

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 30
Max spacer hisKA - HATPase domains 122
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
15 10 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (16 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 15
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (19) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family AmiR_NasR Family CheY Family IclR Family unclassified Family OmpR Family NarL Family AmiR_NasR Family CheY Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 0MerR 0NarL 8
NtrC 0OmpR 6PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 1
misPredicted TCS proteins (6)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 4
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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