CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Leisingera methylohalidivorans DSM 14336
 

Leisingera methylohalidivorans DSM 14336

Genome
 

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Total size (bp) 4144900
G + C content (%) 62.37
Coding sequences 4027
Coding density (%) 84.43
Average gene length (bp) 869

Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 28
Max spacer hisKA - HATPase domains 56
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
31 11 0 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (27 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 10
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (28) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family RsbU Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family RsbU Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 2
NtrC 4OmpR 10PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 2RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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