CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Kosmotoga olearia TBF 19.5.1
 

Kosmotoga olearia TBF 19.5.1

Genome
 

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Total size (bp) 2302126
G + C content (%) 41.55
Coding sequences 2118
Coding density (%) 88.17
Average gene length (bp) 958

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 51
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
7 11 1 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (15 + 0) - Phylogenetic Tree - Data Heatmap
Classic Unorthodox Classic Unorthodox
Histidine Kinase, Classic 14
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (16) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family RpfG Family RsbU Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family LytTR Family RpfG Family RsbU Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 0
NtrC 1OmpR 7PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 2RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 1
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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