CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Isosphaera pallida ATCC 43644
 

Isosphaera pallida ATCC 43644

Genome
 

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Total size (bp) 5472964
G + C content (%) 62.45
Coding sequences 3690
Coding density (%) 84.38
Average gene length (bp) 1252

Histidine domain Logo
Mean spacer hisKA - HATPase domains 51
Min spacer hisKA - HATPase domains 35
Max spacer hisKA - HATPase domains 179
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
46 9 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (33 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 14
Histidine Kinase, Hybrid 15
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (30) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family RpfG Family RsbU Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family NarL Family RpfG Family RsbU Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 7OmpR 1PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 1RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 10
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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