CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Ignavibacterium album JCM 16511
 

Ignavibacterium album JCM 16511

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 3658997
G + C content (%) 33.94
Coding sequences 3195
Coding density (%) 92.42
Average gene length (bp) 1058

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 54
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
49 14 5 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (46 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 27
Histidine Kinase, Hybrid 16
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (41) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family CheY Family PglZ Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family CheY Family PglZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 6
NtrC 9OmpR 5PglZ 1PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(5)
HisKa 5
Hpt 0

Locations of visitors to this page