CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Hyphomonas neptunium ATCC 15444
 

Hyphomonas neptunium ATCC 15444

Genome
 

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Total size (bp) 3705021
G + C content (%) 61.93
Coding sequences 3505
Coding density (%) 90.53
Average gene length (bp) 957

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 33
Max spacer hisKA - HATPase domains 55
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
34 7 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (25 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 19
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (27) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 2
NtrC 2OmpR 10PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 2RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 1
Hpt 2

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