CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database
 

Hypersaline Mat 09(Y)

Metagenome
 
Total size (bp) 8382678
G + C content (%) 58.5
Coding sequences
Coding density (%) 0
Average gene length (bp) 0

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 37
Max spacer hisKA - HATPase domains 56
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (30 + 37)
Classic Classic
Histidine Kinase, Classic 30
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 37
P2CS Predicted Response Regulators (124)
OmpR Family NarL Family LytTR Family CheV Family AmiR_NasR Family PleD Family CheY Family FrzZ Family unclassified Family OmpR Family NarL Family LytTR Family CheV Family AmiR_NasR Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 1CheY 62CitT 0CsrA 0
CyC-C 0FrzZ 4HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 6
NtrC 0OmpR 5PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 42
misPredicted TCS proteins (5)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 3
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(23)
HisKa 22
Hpt 1

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