CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database
 

Hypersaline Mat 02(H)

Metagenome
 
Total size (bp) 7469572
G + C content (%) 54.16
Coding sequences
Coding density (%) 0
Average gene length (bp) 0

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 25
Max spacer hisKA - HATPase domains 53
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (20 + 21)
Classic Classic
Histidine Kinase, Classic 20
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 21
P2CS Predicted Response Regulators (110)
PrrA Family OmpR Family NarL Family LytTR Family PleD Family CheY Family FrzZ Family unclassified Family PrrA Family OmpR Family NarL Family LytTR Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 51CitT 0CsrA 0
CyC-C 0FrzZ 2HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 6
NtrC 0OmpR 4PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 1RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 43
misPredicted TCS proteins (11)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 10
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(32)
HisKa 26
Hpt 6

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