CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Hippea maritima DSM 10411
 

Hippea maritima DSM 10411

Genome
 

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Total size (bp) 1694430
G + C content (%) 37.47
Coding sequences 1677
Coding density (%) 92.85
Average gene length (bp) 938
Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 45
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
11 4 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (8 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 7
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (11) - Phylogenetic Tree - Data Heatmap
OmpR Family CheB Family CheV Family PleD Family VieA Family CheY Family unclassified Family OmpR Family CheB Family CheV Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 0
NtrC 0OmpR 3PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 17 April 2024, 1:06:35 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales