CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Herpetosiphon aurantiacus DSM 785
 

Herpetosiphon aurantiacus DSM 785

Genome
 

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Total size (bp) 6346587
G + C content (%) 50.71
Coding sequences 4977
Coding density (%) 87.9
Average gene length (bp) 1121

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 108
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
96 36 5 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (90 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 68
Histidine Kinase, Hybrid 21
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (92) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family YesN Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family Xre Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family YesN Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family Xre Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 35CitT 0CsrA 0
CyC-C 2FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 13
NtrC 1OmpR 20PglZ 0PilB 0PleD 3
PleD_VieA 1PrrA 1RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 1YcbB 0YesN 1unclassified 9
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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