CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Heliobacterium modesticaldum Ice1
 

Heliobacterium modesticaldum Ice1

Genome
 

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Total size (bp) 3075407
G + C content (%) 56.97
Coding sequences 2999
Coding density (%) 86.21
Average gene length (bp) 884

Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 102
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
29 13 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (26 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 6
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (28) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 1
NtrC 2OmpR 7PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 0
Hpt 4

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