CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Halanaerobium praevalens DSM 2228
 

Halanaerobium praevalens DSM 2228

Genome
 

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Total size (bp) 2309262
G + C content (%) 30.29
Coding sequences 2068
Coding density (%) 88.29
Average gene length (bp) 986

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 48
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
11 9 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (13 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 10
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (21) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family Spo0A Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD Family CheY Family CheC Family IclR Family unclassified Family NtrC Family OmpR Family LytTR Family Spo0A Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD Family CheY Family CheC Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 1CheV 1CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 2MerR 0NarL 0
NtrC 1OmpR 5PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 1
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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