CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Haliangium ochraceum DSM 14365
 

Haliangium ochraceum DSM 14365

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 9446314
G + C content (%) 69.48
Coding sequences 6719
Coding density (%) 87.99
Average gene length (bp) 1237

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 106
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
130 22 3 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (104 + 3) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 53
Histidine Kinase, Hybrid 46
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 3
P2CS Predicted Response Regulators (81) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family PleD Family CheY Family Xre Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family PleD Family CheY Family Xre Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 21CitT 0CsrA 0
CyC-C 2FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 16OmpR 5PglZ 0PilB 0PleD 3
PleD_VieA 0PrrA 3RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 1YcbB 0YesN 0unclassified 25
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

Locations of visitors to this page