CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Granulicella mallensis MP5ACTX8
 

Granulicella mallensis MP5ACTX8

Genome
 

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Total size (bp) 6237577
G + C content (%) 57.91
Coding sequences 4815
Coding density (%) 87.32
Average gene length (bp) 1131
Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 7
Max spacer hisKA - HATPase domains 55
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
23 26 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (41 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 37
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (40) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family PleD Family CheY Family TrxB Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family PleD Family CheY Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 9
NtrC 2OmpR 14PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 16 April 2024, 12:39:30 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales