CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Glaciecola nitratireducens FR1064
 

Glaciecola nitratireducens FR1064

Genome
 

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Total size (bp) 4134229
G + C content (%) 42.3
Coding sequences 3654
Coding density (%) 88.39
Average gene length (bp) 1000

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
49 20 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (41 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 20
Histidine Kinase, Hybrid 13
Histidine Kinase, Unorthodox 6
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (51) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family FrzZ Family CheC Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family FrzZ Family CheC Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 1CheV 3CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 7
NtrC 6OmpR 10PglZ 0PilB 0PleD 6
PleD_VieA 4PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (4)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(4)
HisKa 2
Hpt 2

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