CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geobacter uraniireducens Rf4
 

Geobacter uraniireducens Rf4

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 5136364
G + C content (%) 54.24
Coding sequences 4358
Coding density (%) 86.95
Average gene length (bp) 1025

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 73
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
89 48 5 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (94 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 70
Histidine Kinase, Hybrid 17
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 7
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (109) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family VieB Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family VieB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 6
CheC 0CheV 1CheY 27CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 6
NtrC 31OmpR 7PglZ 0PilB 0PleD 5
PleD_VieA 1PrrA 0RpfG 3RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 1WcaA 0
Xre 0YcbB 0YesN 1unclassified 15
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

Locations of visitors to this page