CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geobacter sp. M21
 

Geobacter sp. M21

Genome
 

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Total size (bp) 4745806
G + C content (%) 60.47
Coding sequences 4080
Coding density (%) 86.63
Average gene length (bp) 1008

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 38
Max spacer hisKA - HATPase domains 111
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
131 40 7 2 Pentad 2
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (133 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 73
Histidine Kinase, Hybrid 49
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 9
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (116) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family PilB Family Xre Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family PilB Family Xre Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 7
CheC 0CheV 1CheY 27CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 5
NtrC 28OmpR 8PglZ 0PilB 1PleD 4
PleD_VieA 3PrrA 1RpfG 5RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 1YcbB 0YesN 0unclassified 23
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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