CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geobacter sp. FRC-32
 

Geobacter sp. FRC-32

Genome
 

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Total size (bp) 4304501
G + C content (%) 53.47
Coding sequences 3798
Coding density (%) 89.9
Average gene length (bp) 1019

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 18
Max spacer hisKA - HATPase domains 53
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
81 30 7 0 Pentad 2
Hexad2
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (89 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 65
Histidine Kinase, Hybrid 17
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 7
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (95) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family PilB Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family PilB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 6
CheC 0CheV 1CheY 28CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 23OmpR 8PglZ 0PilB 1PleD 4
PleD_VieA 2PrrA 0RpfG 4RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 14
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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