CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geobacter metallireducens GS-15
 

Geobacter metallireducens GS-15

Genome
 

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Total size (bp) 3997420
G + C content (%) 59.51
Coding sequences 3520
Coding density (%) 90.89
Average gene length (bp) 1032

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 107
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
77 27 7 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (84 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 56
Histidine Kinase, Hybrid 21
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (72) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD Family CheY Family PilB Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD Family CheY Family PilB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 5
CheC 0CheV 1CheY 22CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 17OmpR 7PglZ 0PilB 1PleD 5
PleD_VieA 0PrrA 0RpfG 3RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 6
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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