CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geobacter lovleyi SZ
 

Geobacter lovleyi SZ

Genome
 

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Total size (bp) 3917761
G + C content (%) 54.77
Coding sequences 3606
Coding density (%) 91.85
Average gene length (bp) 998

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 58
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
89 36 7 1 Decad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (98 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 54
Histidine Kinase, Hybrid 31
Histidine Kinase, Unorthodox 8
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (97) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 2CheY 28CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 4
NtrC 23OmpR 8PglZ 0PilB 0PleD 9
PleD_VieA 2PrrA 0RpfG 4RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 12
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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