CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geobacter bemidjiensis Bem
 

Geobacter bemidjiensis Bem

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 4615150
G + C content (%) 60.27
Coding sequences 4057
Coding density (%) 87.91
Average gene length (bp) 1000

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 38
Max spacer hisKA - HATPase domains 64
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
126 37 6 2 Pentad 2
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (125 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 63
Histidine Kinase, Hybrid 50
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 8
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (110) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family Xre Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family Xre Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 6
CheC 0CheV 1CheY 27CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 2
NtrC 25OmpR 11PglZ 0PilB 0PleD 5
PleD_VieA 3PrrA 1RpfG 4RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 1YcbB 0YesN 0unclassified 21
misPredicted TCS proteins (5)
misPredicted Histidine Kinase 3
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page