CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Gemmatimonas aurantiaca T-27
 

Gemmatimonas aurantiaca T-27

Genome
 

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Total size (bp) 4636964
G + C content (%) 64.27
Coding sequences 3935
Coding density (%) 92.13
Average gene length (bp) 1086

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 8
Max spacer hisKA - HATPase domains 92
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
64 28 2 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (66 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 42
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (61) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family PglZ Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family PglZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 10MerR 0NarL 8
NtrC 9OmpR 13PglZ 1PilB 0PleD 1
PleD_VieA 2PrrA 0RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 3
Hpt 0

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