CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Geitlerinema sp. PCC 7407
 

Geitlerinema sp. PCC 7407

Genome
 

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Total size (bp) 4681111
G + C content (%) 58.47
Coding sequences 3815
Coding density (%) 83.66
Average gene length (bp) 1027

Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 148
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
116 13 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (99 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 57
Histidine Kinase, Hybrid 33
Histidine Kinase, Unorthodox 6
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (50) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 14CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 7
NtrC 0OmpR 12PglZ 0PilB 0PleD 4
PleD_VieA 3PrrA 0RpfG 1RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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