CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Gardnerella vaginalis ATCC 14019
 

Gardnerella vaginalis ATCC 14019

Genome
 

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Total size (bp) 1667350
G + C content (%) 41.36
Coding sequences 1365
Coding density (%) 87.51
Average gene length (bp) 1069

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 27
Max spacer hisKA - HATPase domains 73
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
6 5 0 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (7 + 0) - Phylogenetic Tree - Data Heatmap
Classic Classic
Histidine Kinase, Classic 7
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (8) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family AmiR_NasR Family OmpR Family NarL Family AmiR_NasR Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 0CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 4
NtrC 0OmpR 3PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 2
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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