CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Frankia alni ACN14a
 

Frankia alni ACN14a

Genome
 

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Total size (bp) 7497934
G + C content (%) 72.82
Coding sequences 6707
Coding density (%) 86.6
Average gene length (bp) 968

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 28
Max spacer hisKA - HATPase domains 127
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
50 26 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (51 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 44
Histidine Kinase, Hybrid 6
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (53) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family RsbU Family AmiR_NasR Family CheY Family Sarp Family TrxB Family IclR Family unclassified Family OmpR Family NarL Family RsbU Family AmiR_NasR Family CheY Family Sarp Family TrxB Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 9CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 0MerR 0NarL 19
NtrC 0OmpR 15PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 2Sarp 1
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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