CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Fibrobacter succinogenes subsp. succinogenes S85
 

Fibrobacter succinogenes subsp. succinogenes S85

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 3842635
G + C content (%) 48.05
Coding sequences 3085
Coding density (%) 90.79
Average gene length (bp) 1131

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 45
Max spacer hisKA - HATPase domains 51
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
11 4 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (12 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 4
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (11) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family RpfG Family PleD_VieA Family PleD Family CheY Family NtrC Family OmpR Family LytTR Family RpfG Family PleD_VieA Family PleD Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 1CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 0
NtrC 1OmpR 3PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

Locations of visitors to this page