CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Fibrella aestuarina BUZ 2
 

Fibrella aestuarina BUZ 2

Genome
 

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Total size (bp) 6775444
G + C content (%) 56.46
Coding sequences 5480
Coding density (%) 88.45
Average gene length (bp) 1094

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 56
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
107 33 4 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (97 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 83
Histidine Kinase, Hybrid 10
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (71) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheY Family TrxB Family PglZ Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheY Family TrxB Family PglZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 19CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 19MerR 0NarL 11
NtrC 4OmpR 10PglZ 1PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (5)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 3
misPredicted Phosphotransfer Protein 2
Phosphotransfer Proteins(17)
HisKa 17
Hpt 0

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