CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Faecalibacterium prausnitzii L2-6
 

Faecalibacterium prausnitzii L2-6

Genome
 

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Total size (bp) 3321367
G + C content (%) 55.57
Coding sequences 2748
Coding density (%) 71.55
Average gene length (bp) 865

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 48
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
16 14 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (17 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 14
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (23) - Phylogenetic Tree - Data Heatmap
OmpR Family LytTR Family Spo0A Family YesN Family RpfG Family unclassified Family OmpR Family LytTR Family Spo0A Family YesN Family RpfG Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 0CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 5MerR 0NarL 0
NtrC 0OmpR 10PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 2RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 4unclassified 1
misPredicted TCS proteins (11)
misPredicted Histidine Kinase 6
misPredicted Response Regulator 5
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 1
Hpt 2

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