CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Faecalibacterium prausnitzii SL3/3
 

Faecalibacterium prausnitzii SL3/3

Genome
 

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Total size (bp) 3214418
G + C content (%) 54.81
Coding sequences 2740
Coding density (%) 74.45
Average gene length (bp) 873

Histidine domain Logo
Mean spacer hisKA - HATPase domains 30
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
19 16 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (25 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 22
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (25) - Phylogenetic Tree - Data Heatmap
OmpR Family LytTR Family Spo0A Family YesN Family RpfG Family OmpR Family LytTR Family Spo0A Family YesN Family RpfG Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 0CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 8MerR 0NarL 0
NtrC 0OmpR 12PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 2RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 0
misPredicted TCS proteins (9)
misPredicted Histidine Kinase 3
misPredicted Response Regulator 5
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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