CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Emticicia oligotrophica DSM 17448
 

Emticicia oligotrophica DSM 17448

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 4798158
G + C content (%) 35.7
Coding sequences 3950
Coding density (%) 89.24
Average gene length (bp) 1084

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 60
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
39 23 3 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (43 + 4) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 37
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 4
P2CS Predicted Response Regulators (48) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheY Family PglZ Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheY Family PglZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 8CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 15MerR 0NarL 6
NtrC 2OmpR 11PglZ 1PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(7)
HisKa 7
Hpt 0

Locations of visitors to this page