CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Eggerthella sp. YY7918
 

Eggerthella sp. YY7918

Genome
 

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Total size (bp) 3123671
G + C content (%) 56.2
Coding sequences 2680
Coding density (%) 88.06
Average gene length (bp) 1026

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 50
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
13 17 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (24 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 21
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (23) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family RpfG Family PleD_VieA Family unclassified Family OmpR Family NarL Family LytTR Family RpfG Family PleD_VieA Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 0CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 4
NtrC 0OmpR 14PglZ 0PilB 0PleD 0
PleD_VieA 1PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 1
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 0
Hpt 3

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