CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Edwardsiella tarda C07-087
 

Edwardsiella tarda C07-087

Genome
 

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Total size (bp) 3857040
G + C content (%) 59.6
Coding sequences 3405
Coding density (%) 84.77
Average gene length (bp) 960

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 50
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
21 21 0 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (30 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 23
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (32) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family PleD Family CitT Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family PleD Family CitT Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 1CitT 1CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 7
NtrC 2OmpR 13PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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