CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Dyadobacter fermentans DSM 18053
 

Dyadobacter fermentans DSM 18053

Genome
 

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Total size (bp) 6967790
G + C content (%) 51.54
Coding sequences 5719
Coding density (%) 89.77
Average gene length (bp) 1094

Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 76
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
133 37 5 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (88 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 60
Histidine Kinase, Hybrid 25
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (112) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family YesN Family RsbU Family CheY Family FrzZ Family TrxB Family PglZ Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family YesN Family RsbU Family CheY Family FrzZ Family TrxB Family PglZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 30CitT 0CsrA 0
CyC-C 1FrzZ 3HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 30MerR 0NarL 23
NtrC 6OmpR 12PglZ 1PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(24)
HisKa 22
Hpt 2

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