CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfobacula toluolica Tol2
 

Desulfobacula toluolica Tol2

Genome
 

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Total size (bp) 5197905
G + C content (%) 41.45
Coding sequences 4375
Coding density (%) 87.48
Average gene length (bp) 1039

Histidine domain Logo
Mean spacer hisKA - HATPase domains 48
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 134
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
100 40 10 1 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (113 + 4) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 60
Histidine Kinase, Hybrid 45
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 4
P2CS Predicted Response Regulators (105) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family MerR Family TrxB Family VieB Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family MerR Family TrxB Family VieB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 1CheY 28CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 1NarL 5
NtrC 24OmpR 6PglZ 0PilB 0PleD 4
PleD_VieA 1PrrA 0RpfG 5RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 1WcaA 0
Xre 0YcbB 0YesN 0unclassified 25
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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