CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfovibrio salexigens DSM 2638
 

Desulfovibrio salexigens DSM 2638

Genome
 

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Total size (bp) 4289847
G + C content (%) 47.09
Coding sequences 3807
Coding density (%) 88.67
Average gene length (bp) 999

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 107
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
108 24 8 2 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (88 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 57
Histidine Kinase, Hybrid 21
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (92) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD Family CheY Family FrzZ Family VieB Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD Family CheY Family FrzZ Family VieB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 5CheY 33CitT 0CsrA 0
CyC-C 1FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 2
NtrC 11OmpR 4PglZ 0PilB 0PleD 5
PleD_VieA 0PrrA 0RpfG 9RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 0VieB 1WcaA 0
Xre 0YcbB 0YesN 0unclassified 11
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(13)
HisKa 2
Hpt 11

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