CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfocapsa sulfexigens DSM 10523
 

Desulfocapsa sulfexigens DSM 10523

Genome
 

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Total size (bp) 3986761
G + C content (%) 45.38
Coding sequences 3494
Coding density (%) 89.52
Average gene length (bp) 1021

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 96
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
99 31 2 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (101 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 48
Histidine Kinase, Hybrid 48
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (66) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family ArsR Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family ArsR Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 1BetR 0CheB 2
CheC 0CheV 0CheY 9CitT 0CsrA 0
CyC-C 2FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 6
NtrC 19OmpR 5PglZ 0PilB 0PleD 2
PleD_VieA 1PrrA 1RpfG 4RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 11
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 1
Hpt 3

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