CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfobulbus propionicus DSM 2032
 

Desulfobulbus propionicus DSM 2032

Genome
 

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Total size (bp) 3851869
G + C content (%) 58.93
Coding sequences 3283
Coding density (%) 88.31
Average gene length (bp) 1036

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 128
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
92 25 5 1 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (86 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 40
Histidine Kinase, Hybrid 38
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (76) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 20CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 2
NtrC 18OmpR 5PglZ 0PilB 0PleD 4
PleD_VieA 2PrrA 2RpfG 5RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 15
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 1
Hpt 3

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