CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfosporosinus meridiei DSM 13257
 

Desulfosporosinus meridiei DSM 13257

Genome
 

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Total size (bp) 4873567
G + C content (%) 41.78
Coding sequences 4352
Coding density (%) 82.26
Average gene length (bp) 921

Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 152
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
45 43 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (66 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 57
Histidine Kinase, Hybrid 6
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (65) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family IclR Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family IclR Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 11CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 3MerR 0NarL 5
NtrC 7OmpR 25PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 2TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 3unclassified 1
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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