CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfurispirillum indicum S5
 

Desulfurispirillum indicum S5

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 2928377
G + C content (%) 56.11
Coding sequences 2571
Coding density (%) 88.34
Average gene length (bp) 1006

Histidine domain Logo
Mean spacer hisKA - HATPase domains 31
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 67
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
79 19 3 2 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (73 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 59
Histidine Kinase, Hybrid 8
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (66) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family IclR Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family IclR Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 3CheY 15CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 11OmpR 6PglZ 0PilB 0PleD 7
PleD_VieA 2PrrA 0RpfG 1RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 14
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page