CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfitobacterium hafniense DCB-2
 

Desulfitobacterium hafniense DCB-2

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 5279134
G + C content (%) 47.54
Coding sequences 4883
Coding density (%) 86.27
Average gene length (bp) 933

Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 7
Max spacer hisKA - HATPase domains 60
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
31 46 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (59 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 54
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (67) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family AmiR_NasR Family PleD Family CheY Family Sarp Family IclR Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family AmiR_NasR Family PleD Family CheY Family Sarp Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 2
LmbE 0LysR 0LytTR 4MerR 0NarL 6
NtrC 3OmpR 32PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 2
Spo0A 2TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page