CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfomicrobium baculatum DSM 4028
 

Desulfomicrobium baculatum DSM 4028

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 3942657
G + C content (%) 58.64
Coding sequences 3436
Coding density (%) 89.63
Average gene length (bp) 1028
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 72
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
88 29 7 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (85 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 43
Histidine Kinase, Hybrid 37
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (86) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family TrxB Family VieB Family IclR Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family TrxB Family VieB Family IclR Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 23CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 2MerR 0NarL 7
NtrC 18OmpR 3PglZ 0PilB 0PleD 4
PleD_VieA 1PrrA 0RpfG 8RsbU 1Sarp 0
Spo0A 0TrxB 1VieA 0VieB 2WcaA 0
Xre 0YcbB 0YesN 0unclassified 13
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

Locations of visitors to this page
Date : 17 April 2024, 1:01:21 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales