CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfatibacillum alkenivorans AK-01
 

Desulfatibacillum alkenivorans AK-01

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 6517073
G + C content (%) 54.48
Coding sequences 5252
Coding density (%) 87.1
Average gene length (bp) 1081

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 83
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
145 21 10 0 Hexad1
Heptad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (129 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 52
Histidine Kinase, Hybrid 66
Histidine Kinase, Unorthodox 7
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (99) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family PilB Family FrzZ Family MerR Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family PilB Family FrzZ Family MerR Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 1CheY 33CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 1NarL 3
NtrC 11OmpR 7PglZ 0PilB 1PleD 6
PleD_VieA 1PrrA 0RpfG 7RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 21
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

Locations of visitors to this page